Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN06295900_101451 | Not Available | Negative | 496597 - 497826 | 42505.6 |
| outer membrane protein (porin) | SAMN06295900_101452 | Not Available | Negative | 497995 - 499062 | 37111.6 |
| transcriptional regulator, arac family | SAMN06295900_101453 | Not Available | Negative | 499142 - 500158 | 36777.3 |
| molybdenum cofactor biosynthesis protein f | SAMN06295900_101454 | Not Available | Positive | 500377 - 501219 | 30411.4 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN06295900_101455 | Not Available | Positive | 501216 - 502022 | 27167.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_101456 | Not Available | Negative | 502032 - 502832 | 27458.7 |
| regulatory protein, luxr family | SAMN06295900_101457 | Not Available | Positive | 503011 - 503802 | 28813.9 |
| hypothetical protein | SAMN06295900_101458 | Not Available | Negative | 504029 - 504280 | 8819.09 |
| hypothetical protein | SAMN06295900_101459 | Not Available | Positive | 504360 - 504809 | 13841.4 |
| Trna-gly | Not Available | Not Available | Positive | 505072 - 505146 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.