Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_101431 | Not Available | Negative | 475852 - 477153 | 47295.9 |
| rhodanese-related sulfurtransferase | SAMN06295900_101432 | Not Available | Negative | 477575 - 477898 | 11625.7 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN06295900_101433 | Not Available | Negative | 477987 - 478640 | 23975.1 |
| hypothetical protein | SAMN06295900_101434 | Not Available | Negative | 478765 - 479022 | 9215.02 |
| protein of unknown function | SAMN06295900_101435 | Not Available | Positive | 479558 - 480151 | 21585.8 |
| undecaprenyl-diphosphatase | SAMN06295900_101436 | Not Available | Positive | 480240 - 481076 | 29917.2 |
| trna (guanine-n(7)-)-methyltransferase | SAMN06295900_101437 | Not Available | Negative | 481137 - 481880 | 27434.7 |
| hypothetical protein | SAMN06295900_101438 | Not Available | Negative | 482063 - 482269 | 7649.06 |
| hypothetical protein | SAMN06295900_101439 | Not Available | Positive | 482602 - 484299 | 57832.5 |
| siderophore-interacting fad-binding domain-containing protein | SAMN06295900_101440 | Not Available | Negative | 484351 - 485094 | 26552.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.