Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative holliday junction resolvase | SAMN06295900_101391 | Not Available | Positive | 436765 - 437199 | 15900.9 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN06295900_101392 | Not Available | Positive | 437186 - 437701 | 18603.0 |
| aspartate carbamoyltransferase | SAMN06295900_101393 | Not Available | Positive | 437839 - 438870 | 37487.3 |
| dihydroorotase | SAMN06295900_101394 | Not Available | Positive | 438937 - 440214 | 44612.5 |
| lyso-ornithine lipid acyltransferase | SAMN06295900_101395 | Not Available | Positive | 440248 - 441063 | 29932.5 |
| adenylylsulfate kinase | SAMN06295900_101396 | Not Available | Negative | 441076 - 441597 | 18616.3 |
| bis(5'nucleosyl)-tetraphosphatase, apah | SAMN06295900_101397 | Not Available | Negative | 441790 - 442638 | 31190.4 |
| dtdp-glucose 4,6-dehydratase | SAMN06295900_101398 | Not Available | Positive | 442906 - 443997 | 40498.4 |
| glucose-1-phosphate thymidylyltransferase | SAMN06295900_101399 | Not Available | Positive | 443984 - 444889 | 33080.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN06295900_101400 | Not Available | Positive | 444874 - 445425 | 20489.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.