Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN06295900_101381 | Not Available | Negative | 425663 - 428149 | 90210.1 |
| fecr family protein | SAMN06295900_101382 | Not Available | Negative | 428414 - 429433 | 36696.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295900_101383 | Not Available | Negative | 429430 - 429945 | 19201.3 |
| chaperonin groes | SAMN06295900_101384 | Not Available | Positive | 430207 - 430497 | 10507.8 |
| chaperonin groel | SAMN06295900_101385 | Not Available | Positive | 430540 - 432180 | 57116.9 |
| transcriptional regulator, alpa family | SAMN06295900_101386 | Not Available | Positive | 432825 - 433349 | 18481.1 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN06295900_101387 | Not Available | Negative | 433377 - 434231 | 30314.6 |
| rubredoxin | SAMN06295900_101388 | Not Available | Positive | 434421 - 434591 | 6513.7 |
| hypothetical protein | SAMN06295900_101389 | Not Available | Positive | 434735 - 436000 | 44132.4 |
| putative transcriptional regulator | SAMN06295900_101390 | Not Available | Positive | 436190 - 436768 | 20692.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.