Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf modulated sigma54 specific transcriptional regulator, fis family | SAMN06295900_101371 | Not Available | Negative | 411123 - 413153 | 73061.3 |
| prolyl aminopeptidase serine peptidase. merops family s33 | SAMN06295900_101372 | Not Available | Positive | 413429 - 414412 | 35748.1 |
| hypothetical protein | SAMN06295900_101373 | Not Available | Negative | 414422 - 414691 | 9762.97 |
| alcohol dehydrogenase (cytochrome c) | SAMN06295900_101374 | Not Available | Positive | 415240 - 416967 | 61691.8 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_101375 | Not Available | Positive | 417131 - 418369 | 42463.6 |
| aldehyde dehydrogenase | SAMN06295900_101376 | Not Available | Positive | 418578 - 420104 | 55500.9 |
| outer membrane protein (porin) | SAMN06295900_101377 | Not Available | Negative | 420338 - 421567 | 42553.2 |
| methyl-accepting chemotaxis sensory transducer with tarh sensor | SAMN06295900_101378 | Not Available | Positive | 421825 - 423405 | 54753.8 |
| transcriptional regulator, gntr family | SAMN06295900_101379 | Not Available | Negative | 423543 - 424295 | 27186.4 |
| 6-phosphogluconolactonase | SAMN06295900_101380 | Not Available | Negative | 424411 - 425538 | 40509.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.