Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dienoyl-coa reductase | SAMN06295900_101321 | Not Available | Positive | 343124 - 344239 | 40247.8 |
| trap-type uncharacterized transport system, substrate-binding protein | SAMN06295900_101322 | Not Available | Positive | 344356 - 345852 | 52658.7 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN06295900_101323 | Not Available | Positive | 345956 - 346597 | 24112.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN06295900_101324 | Not Available | Negative | 346659 - 347732 | 38007.4 |
| hypothetical protein | SAMN06295900_101325 | Not Available | Negative | 347972 - 350074 | 74174.6 |
| hypothetical protein | SAMN06295900_101326 | Not Available | Negative | 350218 - 352269 | 70617.0 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN06295900_101327 | Not Available | Positive | 353598 - 354626 | 36905.3 |
| mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN06295900_101328 | Not Available | Positive | 354642 - 356234 | 56844.4 |
| undecaprenyl-phosphate glucose phosphotransferase | SAMN06295900_101329 | Not Available | Positive | 356252 - 357655 | 52323.1 |
| polysaccharide export outer membrane protein | SAMN06295900_101330 | Not Available | Positive | 357748 - 358896 | 40503.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.