Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_101290 | Not Available | Positive | 317134 - 317364 | 8768.86 |
| Trna-lys | Not Available | Not Available | Positive | 317403 - 317478 | Not Available |
| tol-pal system protein ybgf | SAMN06295900_101292 | Not Available | Negative | 317684 - 318433 | 27675.4 |
| peptidoglycan-associated lipoprotein | SAMN06295900_101293 | Not Available | Negative | 318456 - 318959 | 18453.7 |
| tolb protein | SAMN06295900_101294 | Not Available | Negative | 318979 - 320271 | 45617.8 |
| cell division and transport-associated protein tola | SAMN06295900_101295 | Not Available | Negative | 320383 - 321390 | 36672.3 |
| cell division and transport-associated protein tolr | SAMN06295900_101296 | Not Available | Negative | 321387 - 321833 | 16037.7 |
| cell division and transport-associated protein tolq | SAMN06295900_101297 | Not Available | Negative | 321844 - 322521 | 24957.2 |
| (3s)-malyl-coa thioesterase | SAMN06295900_101298 | Not Available | Negative | 322679 - 323149 | 17467.9 |
| 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase | SAMN06295900_101299 | Not Available | Negative | 323227 - 323973 | 26237.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.