Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide transporter | SAMN06295900_101260 | Not Available | Positive | 287864 - 288502 | 23038.1 |
| phosphotransferase enzyme family protein | SAMN06295900_101261 | Not Available | Positive | 288526 - 289782 | 45672.2 |
| superfamily ii dna and rna helicase | SAMN06295900_101262 | Not Available | Negative | 290004 - 291302 | 46866.0 |
| probable addiction module antidote protein | SAMN06295900_101263 | Not Available | Positive | 291465 - 291689 | 8356.75 |
| protein of unknown function duf262 | SAMN06295900_101264 | Not Available | Positive | 292183 - 293232 | 39629.6 |
| hypothetical protein | SAMN06295900_101265 | Not Available | Positive | 293247 - 293909 | 24374.4 |
| hypothetical protein | SAMN06295900_101266 | Not Available | Negative | 294514 - 295023 | 18014.8 |
| hypothetical protein | SAMN06295900_101267 | Not Available | Negative | 295222 - 295389 | 6071.54 |
| putative membrane protein | SAMN06295900_101268 | Not Available | Positive | 295569 - 296117 | 19540.4 |
| plastocyanin | SAMN06295900_101269 | Not Available | Positive | 296098 - 296457 | 12727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.