Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arsr family | SAMN06295900_101250 | Not Available | Negative | 276817 - 277152 | 12351.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06295900_101251 | Not Available | Positive | 277253 - 278113 | 31448.2 |
| sugar phosphate permease | SAMN06295900_101252 | Not Available | Negative | 278201 - 279523 | 46851.6 |
| gluconate kinase, ski family | SAMN06295900_101253 | Not Available | Negative | 279616 - 280152 | 18851.7 |
| transcriptional regulator, laci family | SAMN06295900_101254 | Not Available | Positive | 280306 - 281334 | 36984.5 |
| toxin lf subunit | SAMN06295900_101255 | Not Available | Positive | 281455 - 282654 | 43680.1 |
| hypothetical protein | SAMN06295900_101256 | Not Available | Negative | 282704 - 282844 | 5408.68 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN06295900_101257 | Not Available | Negative | 283026 - 284273 | 42872.9 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_101258 | Not Available | Positive | 284392 - 285330 | 34697.9 |
| iron complex outermembrane recepter protein | SAMN06295900_101259 | Not Available | Positive | 285585 - 287813 | 79173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.