Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate permease, mfs superfamily | SAMN06295900_101220 | Not Available | Positive | 243826 - 245526 | 59159.8 |
| type vi secretion system protein impk | SAMN06295900_101221 | Not Available | Negative | 245554 - 246333 | 28693.7 |
| type vi secretion system protein impj | SAMN06295900_101222 | Not Available | Negative | 246330 - 247676 | 49509.4 |
| type vi secretion system protein vasd | SAMN06295900_101223 | Not Available | Negative | 247764 - 248378 | 21510.2 |
| hypothetical protein | SAMN06295900_101224 | Not Available | Positive | 248714 - 249373 | 23070.2 |
| type vi secretion system protein impb | SAMN06295900_101225 | Not Available | Positive | 249417 - 249965 | 20478.2 |
| type vi secretion system protein impc | SAMN06295900_101226 | Not Available | Positive | 249979 - 251469 | 54999.9 |
| type vi secretion system secreted protein hcp | SAMN06295900_101227 | Not Available | Positive | 251563 - 252051 | 17833.8 |
| type vi secretion system protein impf | SAMN06295900_101228 | Not Available | Positive | 252129 - 252635 | 19178.8 |
| type vi secretion system protein impg | SAMN06295900_101229 | Not Available | Positive | 252688 - 254526 | 67973.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.