Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin d | SAMN06295900_101180 | Not Available | Positive | 190162 - 191583 | 51330.2 |
| outer membrane protein | SAMN06295900_101181 | Not Available | Positive | 191573 - 193054 | 52983.4 |
| hypothetical protein | SAMN06295900_101182 | Not Available | Positive | 193109 - 193423 | 11635.7 |
| hypothetical protein | SAMN06295900_101183 | Not Available | Positive | 193476 - 194393 | 34838.4 |
| matrixin | SAMN06295900_101184 | Not Available | Positive | 195648 - 198641 | 99649.6 |
| pyrroline-5-carboxylate reductase | SAMN06295900_101185 | Not Available | Negative | 198693 - 199505 | 27501.0 |
| hypothetical protein | SAMN06295900_101186 | Not Available | Negative | 199540 - 200238 | 25102.9 |
| glycolate oxidase iron-sulfur subunit | SAMN06295900_101187 | Not Available | Negative | 200340 - 201575 | 45104.9 |
| glycolate oxidase fad binding subunit | SAMN06295900_101188 | Not Available | Negative | 201609 - 202724 | 40470.6 |
| glycolate oxidase | SAMN06295900_101189 | Not Available | Negative | 202824 - 204338 | 53587.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.