Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | SAMN06295900_101160 | Not Available | Positive | 166550 - 168880 | 83390.6 |
| hpch/hpai aldolase/citrate lyase family protein | SAMN06295900_101161 | Not Available | Positive | 169222 - 170025 | 29833.9 |
| hypothetical protein | SAMN06295900_101162 | Not Available | Positive | 170036 - 170743 | 24908.9 |
| 3-dehydroquinate synthase | SAMN06295900_101163 | Not Available | Positive | 170727 - 171803 | 39166.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_101164 | Not Available | Positive | 171809 - 172765 | 34734.3 |
| hypothetical protein | SAMN06295900_101165 | Not Available | Positive | 172758 - 173840 | 40612.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295900_101166 | Not Available | Positive | 173875 - 175407 | 58442.4 |
| glucose-1-phosphate cytidylyltransferase | SAMN06295900_101167 | Not Available | Positive | 175457 - 176227 | 28927.4 |
| cdp-glucose 4,6-dehydratase | SAMN06295900_101168 | Not Available | Positive | 176212 - 177297 | 39938.2 |
| cdp-6-deoxy-d-xylo-4-hexulose-3-dehydrase | SAMN06295900_101169 | Not Available | Positive | 177319 - 178632 | 48641.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.