Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein a | SAMN06295900_101150 | Not Available | Negative | 156668 - 157375 | 25734.4 |
| paraquat-inducible protein a | SAMN06295900_101151 | Not Available | Negative | 157372 - 158034 | 23857.9 |
| cytochrome b561 | SAMN06295900_101152 | Not Available | Positive | 158364 - 158942 | 21313.6 |
| polyisoprenoid-binding protein ycei | SAMN06295900_101153 | Not Available | Positive | 158953 - 159534 | 20420.3 |
| polyisoprenoid-binding protein ycei | SAMN06295900_101154 | Not Available | Positive | 159662 - 160243 | 20807.8 |
| protein translocase subunit secf | SAMN06295900_101155 | Not Available | Negative | 160463 - 161413 | 35278.5 |
| preprotein translocase subunit secd | SAMN06295900_101156 | Not Available | Negative | 161443 - 163494 | 72020.8 |
| protein translocase subunit yajc | SAMN06295900_101157 | Not Available | Negative | 163601 - 163930 | 11498.4 |
| pp_00155 | SAMN06295900_101158 | Not Available | Negative | 164020 - 165204 | Not Available |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN06295900_101159 | Not Available | Negative | 165338 - 166387 | 38152.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.