Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction endonuclease ruvc | SAMN06295900_101130 | Not Available | Negative | 136087 - 136629 | 18549.9 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN06295900_101131 | Not Available | Negative | 136713 - 137843 | 39551.4 |
| hypothetical protein | SAMN06295900_101132 | Not Available | Negative | 137899 - 138684 | 29470.2 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN06295900_101133 | Not Available | Negative | 138903 - 140468 | 55606.4 |
| dna-binding protein fis | SAMN06295900_101134 | Not Available | Negative | 140508 - 140741 | 8767.62 |
| pp_00132 | SAMN06295900_101135 | Not Available | Negative | 140738 - 141802 | Not Available |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN06295900_101136 | Not Available | Negative | 141936 - 143174 | 43809.5 |
| aminopeptidase p metallo peptidase. merops family m24b | SAMN06295900_101137 | Not Available | Negative | 143184 - 144662 | 54441.4 |
| glutathione s-transferase | SAMN06295900_101138 | Not Available | Positive | 144703 - 145383 | 25443.7 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | SAMN06295900_101139 | Not Available | Positive | 145432 - 146286 | 29788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.