Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate dehydrogenase (nad(p)+) | SAMN06295900_101109 | Not Available | Positive | 118674 - 119978 | 46799.0 |
| l-glutamate-binding protein /l-aspartate-binding protein | SAMN06295900_101110 | Not Available | Positive | 120200 - 121096 | 32903.6 |
| l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein | SAMN06295900_101111 | Not Available | Positive | 121183 - 121923 | 27265.8 |
| l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein | SAMN06295900_101112 | Not Available | Positive | 121923 - 122600 | 24618.8 |
| l-glutamate abc transporter atp-binding protein /l-aspartate abc transporter atp-binding protein | SAMN06295900_101113 | Not Available | Positive | 122597 - 123322 | 26678.6 |
| glutamine amidotransferase | SAMN06295900_101114 | Not Available | Negative | 123451 - 124338 | 32427.2 |
| hypothetical protein | SAMN06295900_101115 | Not Available | Negative | 124335 - 124580 | 9425.32 |
| dihydroorotase | SAMN06295900_101116 | Not Available | Positive | 124612 - 125667 | 38059.7 |
| protein of unknown function | SAMN06295900_101117 | Not Available | Positive | 125720 - 126547 | 29918.4 |
| putative redox protein | SAMN06295900_101119 | Not Available | Negative | 127094 - 127516 | 15047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.