Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN06295900_10199 | Not Available | Positive | 105870 - 106286 | 15945.3 |
| transcriptional regulator, rpir family | SAMN06295900_101100 | Not Available | Negative | 106398 - 107219 | 29111.2 |
| 6-phosphogluconate dehydratase | SAMN06295900_101101 | Not Available | Positive | 107525 - 109393 | 65629.1 |
| 2-keto-3-deoxy-phosphogluconate aldolase | SAMN06295900_101102 | Not Available | Positive | 109405 - 110040 | 21972.9 |
| gluconate permease gntt | SAMN06295900_101103 | Not Available | Positive | 110270 - 111655 | 48343.7 |
| gluconate kinase, ski family | SAMN06295900_101104 | Not Available | Positive | 111685 - 112188 | 18379.8 |
| hypothetical protein | SAMN06295900_101105 | Not Available | Negative | 112307 - 113941 | 61277.1 |
| adenylosuccinate lyase | SAMN06295900_101106 | Not Available | Negative | 114147 - 115535 | 51830.0 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN06295900_101107 | Not Available | Negative | 115735 - 117138 | 48187.2 |
| transcriptional regulator, lysr family | SAMN06295900_101108 | Not Available | Positive | 117552 - 118523 | 35974.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.