Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN06295900_10189 | Not Available | Positive | 94891 - 95901 | 36020.9 |
| ferric uptake regulator, fur family | SAMN06295900_10190 | Not Available | Negative | 96337 - 96765 | 16287.5 |
| beta-barrel assembly machine subunit bame | SAMN06295900_10191 | Not Available | Positive | 96860 - 97690 | 29019.0 |
| dihydrodipicolinate reductase | SAMN06295900_10192 | Not Available | Positive | 97827 - 98624 | 27493.0 |
| biopolymer transport protein exbb | SAMN06295900_10193 | Not Available | Positive | 98682 - 99389 | 25396.1 |
| biopolymer transport protein exbd | SAMN06295900_10194 | Not Available | Positive | 99417 - 99872 | 15748.1 |
| leucyl-trna synthetase | SAMN06295900_10195 | Not Available | Positive | 99997 - 102591 | 96167.2 |
| lps-assembly lipoprotein | SAMN06295900_10196 | Not Available | Positive | 102634 - 103185 | 19509.7 |
| dna polymerase iii, delta subunit | SAMN06295900_10197 | Not Available | Positive | 103217 - 104308 | 39144.8 |
| glutamate-5-semialdehyde dehydrogenase | SAMN06295900_10198 | Not Available | Positive | 104469 - 105755 | 45402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.