Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose abc transporter membrane protein | SAMN06295900_102248 | Not Available | Negative | 1076032 - 1077057 | 35252.3 |
| l-arabinose abc transporter atp-binding protein | SAMN06295900_102249 | Not Available | Negative | 1077114 - 1078664 | 55624.2 |
| l-arabinose-binding protein | SAMN06295900_102250 | Not Available | Negative | 1078669 - 1079673 | 35783.0 |
| l-arabinose 1-dehydrogenase (nadp+) | SAMN06295900_102251 | Not Available | Negative | 1079785 - 1080714 | 33784.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN06295900_102252 | Not Available | Negative | 1080729 - 1081655 | 33320.4 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN06295900_102253 | Not Available | Negative | 1081680 - 1082780 | 38086.3 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN06295900_102254 | Not Available | Negative | 1082777 - 1083826 | 35240.2 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN06295900_102255 | Not Available | Negative | 1083823 - 1085355 | 55183.0 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN06295900_102256 | Not Available | Negative | 1085407 - 1086372 | 34930.1 |
| l-arabinonate dehydratase | SAMN06295900_102257 | Not Available | Positive | 1086697 - 1088439 | 62343.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.