Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN06295900_102228 | Not Available | Positive | 1053648 - 1054901 | 44538.5 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_102229 | Not Available | Positive | 1054962 - 1055888 | 33219.4 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN06295900_102230 | Not Available | Positive | 1055980 - 1057521 | 55025.6 |
| cytochrome b561 | SAMN06295900_102231 | Not Available | Negative | 1057536 - 1058072 | 19142.8 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN06295900_102232 | Not Available | Negative | 1058176 - 1060590 | 85895.3 |
| hypothetical protein | SAMN06295900_102233 | Not Available | Negative | 1060545 - 1061819 | 46147.4 |
| polysaccharide deacetylase | SAMN06295900_102234 | Not Available | Negative | 1061816 - 1062616 | 29616.3 |
| hypothetical protein | SAMN06295900_102235 | Not Available | Positive | 1063662 - 1064324 | 23917.4 |
| 6-phosphofructokinase | SAMN06295900_102236 | Not Available | Positive | 1064444 - 1065379 | 32641.4 |
| hypothetical protein | SAMN06295900_102237 | Not Available | Negative | 1065535 - 1065690 | 5111.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.