Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer with tarh sensor | SAMN06295900_102218 | Not Available | Negative | 1039824 - 1041395 | 55064.2 |
| patatin-like phospholipase | SAMN06295900_102219 | Not Available | Positive | 1041928 - 1043130 | 43182.7 |
| methyl-accepting chemotaxis sensory transducer | SAMN06295900_102220 | Not Available | Positive | 1043231 - 1044793 | 54750.8 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_102221 | Not Available | Positive | 1044878 - 1047958 | 112787.0 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN06295900_102222 | Not Available | Positive | 1048082 - 1049197 | 40707.6 |
| pas domain s-box-containing protein | SAMN06295900_102223 | Not Available | Positive | 1049194 - 1051026 | 67798.7 |
| hypothetical protein | SAMN06295900_102224 | Not Available | Positive | 1051036 - 1051350 | 10978.3 |
| hypothetical protein | SAMN06295900_102225 | Not Available | Positive | 1051299 - 1051583 | 10447.3 |
| hypothetical protein | SAMN06295900_102226 | Not Available | Positive | 1051764 - 1051922 | 6125.33 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN06295900_102227 | Not Available | Positive | 1052201 - 1053424 | 41840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.