Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane-anchored protein yjin, duf445 family | SAMN06295900_102198 | Not Available | Positive | 1015533 - 1016837 | 48449.1 |
| hypothetical protein | SAMN06295900_102199 | Not Available | Positive | 1016970 - 1017461 | 17999.8 |
| argininosuccinate synthase | SAMN06295900_102200 | Not Available | Negative | 1017547 - 1018884 | 49673.2 |
| uncharacterized protein yjlb | SAMN06295900_102201 | Not Available | Positive | 1019148 - 1019912 | 27626.2 |
| cupin superfamily protein | SAMN06295900_102202 | Not Available | Negative | 1019952 - 1021166 | 44536.1 |
| hypothetical protein | SAMN06295900_102203 | Not Available | Negative | 1021557 - 1022048 | 17691.5 |
| hypothetical protein | SAMN06295900_102204 | Not Available | Positive | 1022358 - 1022531 | 6488.68 |
| pyrroloquinoline quinone (pqq) biosynthesis protein c | SAMN06295900_102205 | Not Available | Positive | 1022592 - 1024361 | 65211.5 |
| hypothetical protein | SAMN06295900_102206 | Not Available | Positive | 1024315 - 1025235 | 33416.5 |
| penicillin amidase | SAMN06295900_102207 | Not Available | Positive | 1025533 - 1028007 | 89566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.