Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-alpha-acetyl-l-2,4-diaminobutyrate deacetylase | SAMN06295900_102168 | Not Available | Positive | 972624 - 973658 | 36485.6 |
| transcriptional regulator, asnc family | SAMN06295900_102169 | Not Available | Positive | 973675 - 974181 | 19008.7 |
| succinate semialdehyde dehydrogenase | SAMN06295900_102170 | Not Available | Positive | 974328 - 975836 | 53327.9 |
| l-2,4-diaminobutyrate transaminase | SAMN06295900_102171 | Not Available | Positive | 975871 - 977268 | 50407.4 |
| dna-binding protein h-ns | SAMN06295900_102172 | Not Available | Positive | 977616 - 977903 | 10760.8 |
| response regulator receiver domain-containing protein | SAMN06295900_102173 | Not Available | Negative | 977956 - 979014 | 37704.8 |
| signal transduction histidine kinase | SAMN06295900_102174 | Not Available | Negative | 979070 - 982132 | 108135.0 |
| two component transcriptional regulator, winged helix family | SAMN06295900_102175 | Not Available | Negative | 982501 - 983199 | 26376.8 |
| fecr family protein | SAMN06295900_102176 | Not Available | Positive | 983504 - 984910 | 50614.8 |
| sensor domain chase2-containing protein | SAMN06295900_102177 | Not Available | Positive | 984922 - 987357 | 88935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.