Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_102158 | Not Available | Negative | 960638 - 962728 | 74499.2 |
| predicted atpase | SAMN06295900_102159 | Not Available | Positive | 963118 - 964281 | 41826.3 |
| amino acid abc transporter atp-binding protein, paat family | SAMN06295900_102160 | Not Available | Negative | 964312 - 965220 | 33472.7 |
| amino acid abc transporter membrane protein 2, paat family | SAMN06295900_102161 | Not Available | Negative | 965217 - 965885 | 24319.3 |
| amino acid abc transporter membrane protein 1, paat family | SAMN06295900_102162 | Not Available | Negative | 965882 - 966547 | 24009.1 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_102163 | Not Available | Negative | 966683 - 967549 | 30791.8 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN06295900_102164 | Not Available | Positive | 967706 - 969151 | 53576.8 |
| threonine dehydratase | SAMN06295900_102165 | Not Available | Positive | 969291 - 970325 | 35246.5 |
| ornithine cyclodeaminase | SAMN06295900_102166 | Not Available | Positive | 970322 - 971323 | 34667.0 |
| ectoine hydrolase | SAMN06295900_102167 | Not Available | Positive | 971367 - 972617 | 46495.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.