Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, d-galactonate transporter | SAMN06295900_102148 | Not Available | Positive | 948310 - 949662 | 48325.6 |
| transcriptional regulator, tetr family | SAMN06295900_102149 | Not Available | Negative | 949701 - 950378 | 26113.2 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN06295900_102150 | Not Available | Negative | 950421 - 951557 | 41461.8 |
| mfs transporter, mhs family, shikimate and dehydroshikimate transport protein | SAMN06295900_102151 | Not Available | Positive | 951954 - 953258 | 46347.3 |
| transcriptional regulator, iclr family | SAMN06295900_102152 | Not Available | Positive | 953296 - 954069 | 28459.6 |
| acyl-coa dehydrogenase | SAMN06295900_102153 | Not Available | Negative | 954116 - 955249 | 40437.5 |
| transcriptional regulator, arac family | SAMN06295900_102154 | Not Available | Positive | 955523 - 956545 | 37871.8 |
| pas domain s-box-containing protein | SAMN06295900_102155 | Not Available | Positive | 956749 - 958899 | 78913.8 |
| response regulator receiver domain-containing protein | SAMN06295900_102156 | Not Available | Positive | 958917 - 959369 | 16830.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06295900_102157 | Not Available | Positive | 959381 - 960457 | 38777.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.