Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_102128 | Not Available | Negative | 927857 - 928606 | 27734.8 |
| xapx domain-containing protein | SAMN06295900_102129 | Not Available | Positive | 928742 - 929017 | 9750.11 |
| nicotinamidase-related amidase | SAMN06295900_102130 | Not Available | Positive | 929078 - 929764 | 25236.2 |
| xapx domain-containing protein | SAMN06295900_102131 | Not Available | Positive | 929868 - 930035 | 5756.45 |
| hypothetical protein | SAMN06295900_102132 | Not Available | Positive | 930056 - 931939 | 69231.4 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN06295900_102133 | Not Available | Positive | 931941 - 932387 | 15862.5 |
| hypothetical protein | SAMN06295900_102134 | Not Available | Positive | 932424 - 933338 | 32936.1 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN06295900_102135 | Not Available | Positive | 933335 - 934030 | 23667.3 |
| alginate export | SAMN06295900_102136 | Not Available | Positive | 934027 - 935538 | 54934.5 |
| mfs transporter, cp family, cyanate transporter | SAMN06295900_102137 | Not Available | Negative | 935559 - 936791 | 42493.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.