Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | SAMN06295900_102118 | Not Available | Negative | 919061 - 919525 | 17148.0 |
| gtp cyclohydrolase ii | SAMN06295900_102119 | Not Available | Positive | 919725 - 920369 | 23520.1 |
| hypothetical protein | SAMN06295900_102120 | Not Available | Positive | 920611 - 921300 | 25752.6 |
| addiction module antidote protein, higa family | SAMN06295900_102121 | Not Available | Negative | 921234 - 921536 | 11056.2 |
| proteic killer suppression protein | SAMN06295900_102122 | Not Available | Negative | 921544 - 921822 | 10519.4 |
| predicted atpase | SAMN06295900_102123 | Not Available | Negative | 922046 - 924910 | 102937.0 |
| arac-type dna-binding protein | SAMN06295900_102124 | Not Available | Positive | 925237 - 925611 | 13906.7 |
| hypothetical protein | SAMN06295900_102125 | Not Available | Negative | 925440 - 925784 | 13106.0 |
| hd domain-containing protein | SAMN06295900_102126 | Not Available | Positive | 926164 - 926718 | 21096.2 |
| non-heme chloroperoxidase | SAMN06295900_102127 | Not Available | Positive | 926940 - 927938 | 35537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.