Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein/gamma-glutamylputrescine oxidase | SAMN06295900_102108 | Not Available | Negative | 909242 - 910531 | 46910.0 |
| transcriptional regulator, lysr family | SAMN06295900_102109 | Not Available | Positive | 910730 - 911596 | 31731.4 |
| aldehyde dehydrogenase (nad+) | SAMN06295900_102110 | Not Available | Positive | 911841 - 913352 | 53096.9 |
| response regulator receiver protein | SAMN06295900_102111 | Not Available | Negative | 913386 - 914240 | 30791.8 |
| ca2+:h+ antiporter | SAMN06295900_102112 | Not Available | Negative | 914635 - 915723 | 36938.2 |
| dna-3-methyladenine glycosylase | SAMN06295900_102113 | Not Available | Positive | 915840 - 916505 | 23586.5 |
| acyl homoserine lactone synthase | SAMN06295900_102114 | Not Available | Negative | 916530 - 917120 | 21794.4 |
| hypothetical protein | SAMN06295900_102115 | Not Available | Positive | 917261 - 917590 | 12535.1 |
| transcriptional regulator, luxr family | SAMN06295900_102116 | Not Available | Negative | 917553 - 918281 | 27484.8 |
| hypothetical protein | SAMN06295900_102117 | Not Available | Positive | 918750 - 919013 | 8808.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.