Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMN06295900_10268 | Not Available | Positive | 864070 - 865368 | 46385.0 |
| cell wall-associated hydrolase, nlpc family | SAMN06295900_10269 | Not Available | Negative | 865419 - 866984 | 56496.0 |
| atp adenylyltransferase | SAMN06295900_10270 | Not Available | Negative | 867080 - 867997 | 32587.2 |
| hypothetical protein | SAMN06295900_10271 | Not Available | Positive | 868243 - 869373 | 41264.1 |
| hypothetical protein | SAMN06295900_10272 | Not Available | Negative | 869407 - 869685 | 10396.4 |
| porin, oprb family | SAMN06295900_10273 | Not Available | Negative | 869775 - 871196 | 49976.4 |
| tight adherence protein c | SAMN06295900_10274 | Not Available | Negative | 871575 - 872543 | 34987.5 |
| tight adherence protein b | SAMN06295900_10275 | Not Available | Negative | 872590 - 873567 | 36051.3 |
| pilus assembly protein cpaf | SAMN06295900_10276 | Not Available | Negative | 873598 - 874968 | 50494.1 |
| response regulator receiver protein | SAMN06295900_10277 | Not Available | Negative | 874990 - 876198 | 44012.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.