Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein (porin) | SAMN06295900_10258 | Not Available | Positive | 854744 - 855922 | 41691.7 |
| 2-keto-4-pentenoate hydratase | SAMN06295900_10259 | Not Available | Positive | 856084 - 856836 | 27213.5 |
| malonate decarboxylase epsilon subunit | SAMN06295900_10260 | Not Available | Negative | 856896 - 857831 | 33112.7 |
| phosphoribosyl-dephospho-coa transferase | SAMN06295900_10261 | Not Available | Negative | 857834 - 858457 | 22041.4 |
| malonate decarboxylase gamma subunit | SAMN06295900_10262 | Not Available | Negative | 858466 - 859284 | 28962.7 |
| malonate decarboxylase beta subunit | SAMN06295900_10263 | Not Available | Negative | 859281 - 860180 | 31735.0 |
| malonate decarboxylase delta subunit | SAMN06295900_10264 | Not Available | Negative | 860177 - 860509 | 11612.6 |
| triphosphoribosyl-dephospho-coa synthase | SAMN06295900_10265 | Not Available | Negative | 860497 - 861423 | 31833.2 |
| malonate decarboxylase alpha subunit | SAMN06295900_10266 | Not Available | Negative | 861423 - 863105 | 60798.7 |
| transcriptional regulator, gntr family | SAMN06295900_10267 | Not Available | Negative | 863140 - 863922 | 28281.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.