Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-hydroxyarylamine o-acetyltransferase | SAMN06295900_10248 | Not Available | Negative | 844535 - 845305 | 29025.0 |
| l-threonine aldolase | SAMN06295900_10249 | Not Available | Negative | 845326 - 846360 | 35987.1 |
| 2-aminoethylphosphonate-pyruvate transaminase | SAMN06295900_10250 | Not Available | Negative | 846433 - 847503 | 38538.2 |
| phosphonopyruvate decarboxylase | SAMN06295900_10251 | Not Available | Negative | 847503 - 848675 | 41313.7 |
| phosphoenolpyruvate mutase | SAMN06295900_10252 | Not Available | Negative | 848672 - 850369 | 61890.4 |
| choline kinase | SAMN06295900_10253 | Not Available | Negative | 850366 - 851130 | 28301.2 |
| putative membrane protein | SAMN06295900_10254 | Not Available | Negative | 851205 - 852194 | 34234.4 |
| hypothetical protein | SAMN06295900_10255 | Not Available | Negative | 852191 - 853033 | 30604.9 |
| phosphatidylglycerophosphate synthase | SAMN06295900_10256 | Not Available | Negative | 853030 - 853722 | 24739.0 |
| hypothetical protein | SAMN06295900_10257 | Not Available | Positive | 853952 - 854383 | 15348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.