Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_10238 | Not Available | Positive | 832653 - 833570 | 32428.4 |
| protein of unknown function | SAMN06295900_10239 | Not Available | Negative | 833697 - 833909 | 7818.15 |
| fad/fmn-containing dehydrogenase | SAMN06295900_10240 | Not Available | Negative | 833954 - 835342 | 50338.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN06295900_10241 | Not Available | Negative | 835595 - 836992 | 49819.1 |
| sedolisin serine peptidase. merops family s53 | SAMN06295900_10242 | Not Available | Negative | 837115 - 838920 | 63744.1 |
| carboxypeptidase c (cathepsin a) | SAMN06295900_10243 | Not Available | Negative | 839364 - 841061 | 60569.1 |
| predicted purr-regulated permease perm | SAMN06295900_10244 | Not Available | Positive | 841202 - 842278 | 37761.4 |
| hypothetical protein | SAMN06295900_10245 | Not Available | Positive | 842364 - 842903 | 19259.6 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06295900_10246 | Not Available | Negative | 842973 - 843425 | 17088.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295900_10247 | Not Available | Negative | 843522 - 844454 | 34768.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.