Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarase, class i, homodimeric | SAMN06295900_101733 | Not Available | Negative | 789020 - 790555 | 54770.4 |
| threonine/homoserine efflux transporter rhta | SAMN06295900_101734 | Not Available | Negative | 790699 - 791568 | 30446.2 |
| acetyl-coenzyme a synthetase n-terminus | SAMN06295900_101735 | Not Available | Positive | 791987 - 792225 | 8940.49 |
| haemagluttinin repeat-containing protein | SAMN06295900_1021 | Not Available | Positive | 792341 - 793393 | 34100.0 |
| pseudoazurin | SAMN06295900_1022 | Not Available | Negative | 793524 - 793985 | 16342.7 |
| catalase-peroxidase | SAMN06295900_1023 | Not Available | Negative | 794040 - 796196 | 78677.6 |
| hypothetical protein | SAMN06295900_1024 | Not Available | Positive | 796507 - 796926 | 15093.0 |
| 3-oxoadipate enol-lactonase | SAMN06295900_1025 | Not Available | Negative | 797049 - 797807 | 26968.5 |
| 3-oxoadipyl-coa thiolase | SAMN06295900_1026 | Not Available | Negative | 797841 - 799043 | 41729.0 |
| 3-oxoadipate coa-transferase beta subunit | SAMN06295900_1027 | Not Available | Negative | 799084 - 799716 | 22183.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.