Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN06295900_101703 | Not Available | Positive | 758794 - 759771 | 35596.2 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN06295900_101704 | Not Available | Positive | 759780 - 760631 | 31557.1 |
| type vi secretion system protein impg | SAMN06295900_101705 | Not Available | Negative | 760670 - 762493 | 65745.9 |
| diguanylate cyclase/phosphodiesterase | SAMN06295900_101706 | Not Available | Negative | 762623 - 764548 | 69377.9 |
| protein of unknown function | SAMN06295900_101707 | Not Available | Negative | 764545 - 765066 | 18965.8 |
| iron complex outermembrane recepter protein | SAMN06295900_101708 | Not Available | Negative | 765077 - 767125 | 74137.8 |
| dtdp-4-dehydrorhamnose reductase | SAMN06295900_101709 | Not Available | Negative | 767402 - 768328 | 33054.5 |
| copper chaperone | SAMN06295900_101710 | Not Available | Negative | 768336 - 768545 | 7337.65 |
| transcriptional regulator, merr family | SAMN06295900_101711 | Not Available | Positive | 768682 - 769092 | 15038.1 |
| protein of unknown function | SAMN06295900_101712 | Not Available | Positive | 769301 - 769447 | 5706.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.