Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295900_101612 | Not Available | Positive | 661641 - 662141 | 17546.2 |
| putative rna-binding protein, yhby family | SAMN06295900_101613 | Not Available | Negative | 662222 - 662788 | 20177.7 |
| 23s rrna um-2552 2'-o-methyltransferase | SAMN06295900_101614 | Not Available | Positive | 662916 - 663578 | 24488.4 |
| membrane protease ftsh catalytic subunit | SAMN06295900_101615 | Not Available | Positive | 663752 - 665641 | 68617.2 |
| dihydropteroate synthase | SAMN06295900_101616 | Not Available | Positive | 665755 - 666660 | 32216.7 |
| phosphoglucosamine mutase | SAMN06295900_101617 | Not Available | Positive | 666744 - 668102 | 47839.3 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN06295900_101618 | Not Available | Positive | 668383 - 669414 | 36543.3 |
| phosphate abc transporter membrane protein 1, phot family | SAMN06295900_101619 | Not Available | Positive | 669509 - 670492 | 34559.5 |
| phosphate abc transporter membrane protein 2, phot family | SAMN06295900_101620 | Not Available | Positive | 670489 - 671385 | 31674.7 |
| phosphate abc transporter atp-binding protein, phot family | SAMN06295900_101621 | Not Available | Positive | 671401 - 672249 | 31466.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.