Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN06295900_1353 | Not Available | Positive | 6517082 - 6518029 | 34255.9 |
| hypothetical protein | SAMN06295900_1354 | Not Available | Negative | 6517856 - 6518234 | 14429.5 |
| amp-binding enzyme | SAMN06295900_1361 | Not Available | Negative | 6518235 - 6521899 | 134497.0 |
| type ii secretion system protein e (gspe) | SAMN06295900_1371 | Not Available | Positive | 6521900 - 6523102 | 43895.2 |
| type ii secretion system protein f (gspf) | SAMN06295900_1372 | Not Available | Positive | 6523133 - 6524280 | 41552.0 |
| amp-binding enzyme | SAMN06295900_1381 | Not Available | Negative | 6524281 - 6526610 | 86235.6 |
| sulfate adenylyltransferase subunit 1 | SAMN06295900_1391 | Not Available | Negative | 6526620 - 6527917 | 46897.0 |
| sulfate adenylyltransferase subunit 2 | SAMN06295900_1392 | Not Available | Negative | 6528028 - 6528941 | 34295.7 |
| amp-binding enzyme | SAMN06295900_1401 | Not Available | Negative | 6528942 - 6531259 | 84479.6 |
| amino acid adenylation domain-containing protein | SAMN06295900_1411 | Not Available | Negative | 6531260 - 6533121 | 67887.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.