Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co or xanthine dehydrogenase, mo-binding subunit | SAMN06295900_12911 | Not Available | Positive | 6466308 - 6468599 | 82478.1 |
| hypothetical protein | SAMN06295900_12912 | Not Available | Negative | 6468675 - 6469571 | 33598.9 |
| hypothetical protein | SAMN06295900_12913 | Not Available | Negative | 6469538 - 6469792 | 9321.22 |
| hypothetical protein | SAMN06295900_12914 | Not Available | Positive | 6469793 - 6470455 | 25377.0 |
| hypothetical protein | SAMN06295900_12915 | Not Available | Positive | 6470474 - 6470779 | 11475.8 |
| hypothetical protein | SAMN06295900_12916 | Not Available | Positive | 6470844 - 6471167 | 11996.5 |
| type vi secretion system protein vasd | SAMN06295900_12917 | Not Available | Negative | 6471318 - 6471848 | 18715.3 |
| type vi secretion system protein imph | SAMN06295900_12918 | Not Available | Negative | 6471862 - 6473010 | 41779.4 |
| type vi secretion system protein impg | SAMN06295900_12919 | Not Available | Negative | 6473007 - 6474821 | 68026.4 |
| type vi secretion system protein vasj | SAMN06295900_12920 | Not Available | Negative | 6474837 - 6476417 | 58028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.