Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death family protein | SAMN06295900_1262 | Not Available | Negative | 6377539 - 6377829 | 10378.5 |
| reductase c-terminal | SAMN06295900_1263 | Not Available | Negative | 6378031 - 6380388 | 84865.7 |
| hypothetical protein | SAMN06295900_1264 | Not Available | Negative | 6380388 - 6380657 | 10163.2 |
| maleylacetoacetate isomerase | SAMN06295900_1265 | Not Available | Negative | 6380991 - 6381635 | 24002.9 |
| fumarylacetoacetate hydrolase | SAMN06295900_1266 | Not Available | Negative | 6381632 - 6382948 | 46991.6 |
| homogentisate 1,2-dioxygenase | SAMN06295900_1267 | Not Available | Negative | 6383017 - 6384327 | 48668.4 |
| transcriptional regulator, lysr family | SAMN06295900_1268 | Not Available | Positive | 6384477 - 6385427 | 34976.2 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_1269 | Not Available | Negative | 6385441 - 6386343 | 33040.3 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN06295900_12610 | Not Available | Positive | 6386411 - 6387340 | 33955.3 |
| electron transfer flavoprotein beta subunit | SAMN06295900_12611 | Not Available | Negative | 6387334 - 6388131 | 28089.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.