Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_12232 | Not Available | Positive | 6170757 - 6171197 | 15657.7 |
| ssu ribosomal protein s21p | SAMN06295900_12233 | Not Available | Negative | 6171303 - 6171515 | 8379.54 |
| hypothetical protein | SAMN06295900_12234 | Not Available | Negative | 6171662 - 6172249 | 21412.7 |
| flagellin | SAMN06295900_12235 | Not Available | Positive | 6172261 - 6173079 | 27742.3 |
| flagellar hook-associated protein 2 | SAMN06295900_12236 | Not Available | Positive | 6173330 - 6174748 | 46811.8 |
| protein flit | SAMN06295900_12237 | Not Available | Positive | 6174822 - 6175124 | 11081.3 |
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMN06295900_12238 | Not Available | Negative | 6175333 - 6177426 | 75917.1 |
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMN06295900_12239 | Not Available | Negative | 6177423 - 6179771 | 84657.8 |
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMN06295900_12240 | Not Available | Negative | 6179768 - 6181717 | 71373.0 |
| glycosyltransferase like family protein | SAMN06295900_12241 | Not Available | Negative | 6181707 - 6184166 | 89761.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.