Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_120131 | Not Available | Negative | 6011858 - 6012067 | 7747.4 |
| rhs repeat-associated core domain-containing protein | SAMN06295900_120132 | Not Available | Negative | 6012064 - 6016644 | 168232.0 |
| hypothetical protein | SAMN06295900_120133 | Not Available | Negative | 6016658 - 6017080 | 15960.1 |
| hypothetical protein | SAMN06295900_120134 | Not Available | Negative | 6017120 - 6017401 | 9824.51 |
| hypothetical protein | SAMN06295900_1211 | Not Available | Positive | 6017402 - 6017551 | 5492.73 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06295900_1212 | Not Available | Negative | 6017603 - 6018229 | 22433.2 |
| signal transduction histidine kinase | SAMN06295900_1213 | Not Available | Negative | 6018398 - 6019804 | 51317.6 |
| two component transcriptional regulator, winged helix family | SAMN06295900_1214 | Not Available | Negative | 6019801 - 6020493 | 25016.5 |
| outer membrane protein | SAMN06295900_1215 | Not Available | Negative | 6020504 - 6021310 | 29271.4 |
| beta-glucosidase | SAMN06295900_1216 | Not Available | Positive | 6021721 - 6023931 | 78989.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.