Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel | SAMN06295900_12041 | Not Available | Negative | 5920266 - 5921657 | 49804.2 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN06295900_12042 | Not Available | Negative | 5921702 - 5923045 | 48278.5 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN06295900_12043 | Not Available | Negative | 5923042 - 5923656 | 21755.1 |
| fmn adenylyltransferase /riboflavin kinase | SAMN06295900_12044 | Not Available | Positive | 5923834 - 5924874 | 37275.8 |
| isoleucyl-trna synthetase | SAMN06295900_12045 | Not Available | Positive | 5924990 - 5927827 | 104795.0 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN06295900_12046 | Not Available | Positive | 5927827 - 5928327 | 18078.5 |
| phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylase | SAMN06295900_12047 | Not Available | Positive | 5928440 - 5929654 | 43058.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN06295900_12048 | Not Available | Positive | 5929740 - 5930186 | 15747.1 |
| hypothetical protein | SAMN06295900_12049 | Not Available | Negative | 5930216 - 5930752 | 20090.3 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN06295900_12050 | Not Available | Negative | 5930752 - 5931792 | 38524.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.