Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter transmembrane region | SAMN06295900_1201 | Not Available | Negative | 5880797 - 5881567 | 28299.2 |
| membrane fusion protein | SAMN06295900_1202 | Not Available | Negative | 5881626 - 5882885 | 46589.2 |
| hypothetical protein | SAMN06295900_1203 | Not Available | Positive | 5883180 - 5883380 | 7327.33 |
| hypothetical protein | SAMN06295900_1204 | Not Available | Negative | 5883437 - 5883781 | 13097.6 |
| major facilitator superfamily protein | SAMN06295900_1205 | Not Available | Negative | 5884009 - 5884515 | 17462.4 |
| putative spermidine/putrescine transport system permease protein | SAMN06295900_1206 | Not Available | Negative | 5885239 - 5886159 | 33234.7 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN06295900_1207 | Not Available | Negative | 5886159 - 5887028 | 30802.0 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN06295900_1208 | Not Available | Negative | 5887025 - 5888107 | 39375.6 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN06295900_1209 | Not Available | Negative | 5888175 - 5889359 | 43145.2 |
| sugar lactone lactonase yvre | SAMN06295900_12010 | Not Available | Negative | 5889438 - 5890328 | 32221.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.