Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_119101 | Not Available | Negative | 5855577 - 5856500 | 35480.7 |
| Trna-arg | Not Available | Not Available | Positive | 5857046 - 5857120 | Not Available |
| rubredoxin | SAMN06295900_119103 | Not Available | Negative | 5857246 - 5857428 | 6805.94 |
| atp-binding cassette, subfamily f, uup | SAMN06295900_119104 | Not Available | Positive | 5857719 - 5859656 | 70778.2 |
| dna topoisomerase iv subunit b | SAMN06295900_119105 | Not Available | Positive | 5859947 - 5861932 | 72754.8 |
| dna topoisomerase iv subunit a | SAMN06295900_119106 | Not Available | Positive | 5861970 - 5864288 | 83789.5 |
| uncharacterized membrane protein | SAMN06295900_119107 | Not Available | Positive | 5864353 - 5864811 | 16539.1 |
| chromate transporter | SAMN06295900_119108 | Not Available | Negative | 5864849 - 5866114 | 45067.9 |
| diguanylate cyclase/phosphodiesterase | SAMN06295900_119109 | Not Available | Negative | 5866201 - 5868555 | 86073.8 |
| hypothetical protein | SAMN06295900_119110 | Not Available | Positive | 5868586 - 5869194 | 21951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.