Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | SAMN06295900_11991 | Not Available | Positive | 5846436 - 5846810 | 12474.8 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN06295900_11992 | Not Available | Negative | 5846868 - 5848232 | 46668.1 |
| phospholipid-binding protein, pbp family | SAMN06295900_11993 | Not Available | Negative | 5848380 - 5848889 | 18209.2 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN06295900_11994 | Not Available | Negative | 5849152 - 5850549 | 51323.9 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN06295900_11995 | Not Available | Negative | 5850546 - 5851229 | 25965.5 |
| carbonic anhydrase | SAMN06295900_11996 | Not Available | Positive | 5851420 - 5852265 | 31119.2 |
| sulfate permease, mfs superfamily | SAMN06295900_11997 | Not Available | Positive | 5852481 - 5853962 | 50889.4 |
| hypothetical protein | SAMN06295900_11998 | Not Available | Positive | 5854132 - 5854278 | 5679.94 |
| tigr00645 family protein | SAMN06295900_11999 | Not Available | Positive | 5854493 - 5855023 | 19660.7 |
| hypothetical protein | SAMN06295900_119100 | Not Available | Negative | 5855067 - 5855564 | 18473.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.