Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein exbd | SAMN06295900_11961 | Not Available | Positive | 5813545 - 5813970 | 15348.7 |
| outer membrane transport energization protein exbd | SAMN06295900_11962 | Not Available | Positive | 5813980 - 5814408 | 15070.6 |
| hypothetical protein | SAMN06295900_11963 | Not Available | Positive | 5814418 - 5815635 | 43113.5 |
| microcin c transport system substrate-binding protein | SAMN06295900_11964 | Not Available | Positive | 5815632 - 5817545 | 70477.6 |
| microcin c transport system permease protein | SAMN06295900_11965 | Not Available | Positive | 5817553 - 5818599 | 38099.2 |
| microcin c transport system permease protein | SAMN06295900_11966 | Not Available | Positive | 5818553 - 5819659 | 41080.9 |
| microcin c transport system atp-binding protein | SAMN06295900_11967 | Not Available | Positive | 5819656 - 5821320 | 60194.3 |
| proton-dependent oligopeptide transporter, pot family | SAMN06295900_11968 | Not Available | Positive | 5821370 - 5822866 | 53544.6 |
| hypothetical protein | SAMN06295900_11969 | Not Available | Positive | 5822863 - 5823051 | 6496.65 |
| transcriptional regulator, xre family with cupin sensor | SAMN06295900_11970 | Not Available | Negative | 5822964 - 5823539 | 20667.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.