Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylbilane synthase | SAMN06295900_11951 | Not Available | Positive | 5799189 - 5800172 | 34406.2 |
| uroporphyrinogen iii methyltransferase / synthase | SAMN06295900_11952 | Not Available | Positive | 5800190 - 5802244 | 71801.1 |
| hemy protein | SAMN06295900_11953 | Not Available | Positive | 5802247 - 5803440 | 44432.8 |
| d-galactonate transporter | SAMN06295900_11954 | Not Available | Negative | 5803512 - 5804837 | 47360.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN06295900_11955 | Not Available | Negative | 5805009 - 5805767 | 26593.6 |
| aldehyde dehydrogenase (nad+) | SAMN06295900_11956 | Not Available | Negative | 5805960 - 5807399 | 50322.0 |
| inorganic pyrophosphatase | SAMN06295900_11957 | Not Available | Positive | 5807593 - 5808120 | 19469.5 |
| iron complex outermembrane recepter protein | SAMN06295900_11958 | Not Available | Positive | 5809054 - 5811768 | 96517.8 |
| outer membrane transport energization protein tonb | SAMN06295900_11959 | Not Available | Positive | 5811839 - 5812546 | 24900.2 |
| outer membrane transport energization protein exbb | SAMN06295900_11960 | Not Available | Positive | 5812632 - 5813531 | 31302.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.