Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN06295900_11921 | Not Available | Positive | 5760039 - 5761103 | 36638.8 |
| cobalamin-5'-phosphate synthase | SAMN06295900_11922 | Not Available | Positive | 5761100 - 5761903 | 28248.9 |
| alpha-ribazole phosphatase | SAMN06295900_11923 | Not Available | Positive | 5761888 - 5762475 | 20845.2 |
| iron complex transport system substrate-binding protein | SAMN06295900_11924 | Not Available | Negative | 5762513 - 5763454 | 32827.2 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN06295900_11925 | Not Available | Negative | 5763451 - 5764050 | 20803.8 |
| chromosome partitioning protein | SAMN06295900_11926 | Not Available | Positive | 5764188 - 5764811 | 22678.4 |
| l-aspartate 1-decarboxylase | SAMN06295900_11927 | Not Available | Negative | 5764973 - 5765359 | 14360.1 |
| pantothenate synthetase | SAMN06295900_11928 | Not Available | Negative | 5765395 - 5766228 | 31133.7 |
| condensin subunit scpa | SAMN06295900_11929 | Not Available | Negative | 5766343 - 5767218 | 33036.0 |
| protein of unknown function | SAMN06295900_11930 | Not Available | Negative | 5767229 - 5767504 | 10772.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.