Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN06295900_118136 | Not Available | Negative | 5739594 - 5740445 | 31074.6 |
| protein of unknown function | SAMN06295900_118137 | Not Available | Negative | 5740623 - 5741828 | 44179.1 |
| hypothetical protein | SAMN06295900_1191 | Not Available | Positive | 5742229 - 5742342 | 3878.49 |
| uroporphyrinogen-iii c-methyltransferase | SAMN06295900_1192 | Not Available | Positive | 5742390 - 5743166 | 27457.2 |
| sirohydrochlorin cobaltochelatase | SAMN06295900_1193 | Not Available | Negative | 5743362 - 5743745 | 13455.3 |
| lipopolysaccharide export system permease protein | SAMN06295900_1194 | Not Available | Negative | 5743774 - 5744922 | 42734.1 |
| lipopolysaccharide export system permease protein | SAMN06295900_1195 | Not Available | Negative | 5744927 - 5746024 | 41028.8 |
| aminopeptidase a. metallo peptidase. merops family m17 | SAMN06295900_1196 | Not Available | Positive | 5746154 - 5747665 | 53008.1 |
| dna polymerase iii, chi subunit | SAMN06295900_1197 | Not Available | Positive | 5747748 - 5748164 | 15480.6 |
| protein of unknown function | SAMN06295900_1198 | Not Available | Positive | 5748286 - 5749374 | 36987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.