Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN06295900_118126 | Not Available | Negative | 5730227 - 5731462 | 45071.0 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN06295900_118127 | Not Available | Negative | 5731483 - 5732604 | 41239.2 |
| probable phosphoglycerate mutase | SAMN06295900_118128 | Not Available | Negative | 5732655 - 5733374 | 26755.1 |
| short chain enoyl-coa hydratase /enoyl-coa hydratase | SAMN06295900_118129 | Not Available | Negative | 5733387 - 5734175 | 27801.2 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | SAMN06295900_118130 | Not Available | Negative | 5734247 - 5735425 | 43295.5 |
| putative toxin-antitoxin system toxin component, pin family | SAMN06295900_118131 | Not Available | Negative | 5735422 - 5735970 | 19079.2 |
| hypothetical protein | SAMN06295900_118132 | Not Available | Positive | 5736028 - 5736810 | 29310.9 |
| murein tripeptide amidase mpaa | SAMN06295900_118133 | Not Available | Positive | 5736876 - 5738042 | 43356.1 |
| hypothetical protein | SAMN06295900_118134 | Not Available | Negative | 5738069 - 5738650 | 21331.3 |
| uncharacterized membrane protein | SAMN06295900_118135 | Not Available | Negative | 5738824 - 5739507 | 23900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.