Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit k | SAMN06295900_118116 | Not Available | Positive | 5721196 - 5721501 | 10997.9 |
| nadh dehydrogenase subunit l | SAMN06295900_118117 | Not Available | Positive | 5721519 - 5723576 | 74866.5 |
| nadh dehydrogenase subunit m | SAMN06295900_118118 | Not Available | Positive | 5723592 - 5725082 | 53976.6 |
| nadh dehydrogenase subunit n | SAMN06295900_118119 | Not Available | Positive | 5725108 - 5726589 | 53054.2 |
| protein of unknown function | SAMN06295900_118120 | Not Available | Positive | 5726589 - 5726885 | 11078.8 |
| adp-ribose pyrophosphatase | SAMN06295900_118121 | Not Available | Positive | 5726931 - 5727569 | 23731.2 |
| hypothetical protein | SAMN06295900_118122 | Not Available | Positive | 5727686 - 5728177 | 17657.8 |
| acyl dehydratase | SAMN06295900_118123 | Not Available | Positive | 5728334 - 5728810 | 17056.4 |
| acyl dehydratase | SAMN06295900_118124 | Not Available | Positive | 5728807 - 5729304 | 17760.2 |
| gst-like protein | SAMN06295900_118125 | Not Available | Negative | 5729400 - 5730092 | 25817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.