Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit a | SAMN06295900_118106 | Not Available | Positive | 5711500 - 5711859 | 13522.8 |
| nadh dehydrogenase subunit b | SAMN06295900_118107 | Not Available | Positive | 5711923 - 5712402 | 17533.4 |
| nadh dehydrogenase subunit c | SAMN06295900_118108 | Not Available | Positive | 5712423 - 5713025 | 22726.0 |
| nadh dehydrogenase subunit d | SAMN06295900_118109 | Not Available | Positive | 5713035 - 5714288 | 47469.4 |
| nadh dehydrogenase subunit e | SAMN06295900_118110 | Not Available | Positive | 5714413 - 5714898 | 17664.3 |
| nadh dehydrogenase subunit f | SAMN06295900_118111 | Not Available | Positive | 5714895 - 5716220 | 48356.0 |
| nadh dehydrogenase subunit g | SAMN06295900_118112 | Not Available | Positive | 5716457 - 5718790 | 82446.1 |
| nadh dehydrogenase subunit h | SAMN06295900_118113 | Not Available | Positive | 5718791 - 5719855 | 39130.9 |
| nadh dehydrogenase subunit i | SAMN06295900_118114 | Not Available | Positive | 5719868 - 5720356 | 18598.4 |
| nadh dehydrogenase subunit j | SAMN06295900_118115 | Not Available | Positive | 5720481 - 5721179 | 24593.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.